chore(deps): bump seqpro to 0.11.0 and genoray to 2.3.0#157
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- seqpro: DTYPE → DTYPE_co, RDTYPE → RDTYPE_co (imported with alias for zero-diff at call sites) - genoray: SparseGenotypes/SparseDosages removed; replaced with Ragged[V_IDX_TYPE]/Ragged[DOSAGE_TYPE] throughout - Pin dev env to py310 and add python<3.14 guard to prevent resolver picking 3.14 (no pyarrow wheel) Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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Summary
seqprofrom0.9.0→0.11.0andgenorayfrom2.2.1→2.3.0DTYPE/RDTYPE→DTYPE_co/RDTYPE_co; genoraySparseGenotypes/SparseDosagesremoved, replaced withRagged[V_IDX_TYPE]/Ragged[DOSAGE_TYPE])devenv topy310and addpython<3.14guard to prevent solver from picking Python 3.14 (no pyarrow wheel)debug-statementspre-commit hook to exclude_impl.py(uses Python 3.10+matchsyntax, which the hook's Python 3.9 AST can't parse)Test plan
pixi run -e dev gen— test fixtures regenerated cleanlypixi run -e dev test— 373 passed, 5 skipped, 2 xfailed, 0 failurespixi run -e dev ruff check python/— no errors🤖 Generated with Claude Code