CTGCatalog

Complex Trait Genetics Catalog : A collection of commonly used resources for analysis in complex trait genetics, including reference data, publicly sumstats and commonly used tools. All entries in this repo are manually curated.

Reference_data

• Reference genomes
• Biobanks and cohorts
• Allele Frequency reference data
• Databases for Complex Trait Genetics.

Sumstats

• publically available gwas summary statistics
• Including sumstats from established databases, major biobanks, and disease consortiums.

Complex Trait Genomics Tools

• Annotation
• Association_tests
• Colocalization
• Data_processing
• Drug_repurposing
• Fine_mapping
• Functional_genomics
• Gene_set_pathway_analysis
• GxE_interactions
• Heritability_and_genetic_correlation
• HLA
• Imputation
• Mendelian_randomization
• Meta_and_Multi_triat
• Polygenic_risk_scores
• Proteomics
• Simulation
• Tissue_and_single_cell

Population Genetics Tools

• Admixture
• Phylogenetic tree

Visualization tools

• Heatmap
• Correlation
• Venn Diagram
• Variant on protein

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Template

## Template
- SHORT NAME: 
- FULL NAME: 
- YEAR: 
- DESCRIPTION: 
- URL : 
- CITATION: 
- KEY WORDS: 

About

For more Complex Trait Genomics contents, please check https://gwaslab.com/

Contact : gwaslab@gmail.com