wemol-cli-official

Official distribution and documentation entry for wemol-cli and the wemol-cli-official skill package.

This repository is designed for two usage paths:

• CLI path: run wemol-cli directly for module/flow/job operations.
• Agent path: install the skill package in claw (or any skill-capable agent) and let the agent apply built-in install/update workflows.

Who this is for

• CLI users: want command-line control for discovery, submission, tracking, and output download.
• Bio/AI/chem workflow users: want practical workflows (antibody, ADMET, flow recovery, etc.).
• Agent users: want to use a skill package and delegate setup/operations to an agent.

Install

Primary: GitHub Releases

Use release assets from:

• https://github.com/wecomput/wemol-cli/releases

For v1.0.0, the release assets are:

• wemol-cli-v1.0.0-linux-x86_64-musl.tar.gz
• wemol-cli-v1.0.0-macos-apple-silicon.zip
• wemol-cli-v1.0.0-macos-intel.zip
• wemol-cli-v1.0.0-windows-x86_64.zip
• wemol-cli-official.tar.gz (skill package)
• SHA256SUMS

Recommended approach:

1. Open the target release (for example v1.0.0).
2. Download the matching binary archive for your platform.
3. Add the binary directory to PATH if needed.
4. Verify with:

wemol-cli --help
wemol-cli --version

If your release provides installer scripts, run the script from that release asset directly.

Fallback: Official web installer

If you prefer the hosted installer channel:

curl -LsSf https://wemol.wecomput.com/static/wemol-cli/latest/install.sh | sh

Windows PowerShell:

powershell -ExecutionPolicy ByPass -c "irm https://wemol.wecomput.com/static/wemol-cli/latest/install.ps1 | iex"

Quick start (CLI)

wemol-cli --help
wemol-cli host
wemol-cli lang
wemol-cli login
wemol-cli module search antibody

Typical flow:

1. Discover capability: module search or flow search
2. Inspect schema: module get <id> --params-json or flow get <id> --params-template
3. Submit: job submit ...
4. Track: job status, job progress, job wait
5. Recover outputs: job tasks, job output, job download

Use with agents (skill package)

wemol-cli-official can be consumed as a standalone skill package.

You can:

• install wemol-cli-official into claw or any compatible skill-capable agent, or
• download only wemol-cli-official.tar.gz from release assets and let the agent perform install/update guidance automatically.

The skill includes operational workflows for:

• install/update checks
• auth/session/host/lang handling
• module/flow parameter discovery
• job diagnosis and output recovery

Examples

• Antibody numbering (variable region)
• Protein physicochemical properties
• ADMET AI
• Flow submit + download recovery
• Job history recovery
• Run-limit error handling

References

• Install
• Session and host
• Module workflow
• Flow workflow
• Job workflow
• Output and agent notes

Release artifacts (suggested)

Current v1.0.0 artifacts:

• wemol-cli-v1.0.0-linux-x86_64-musl.tar.gz
• wemol-cli-v1.0.0-macos-apple-silicon.zip
• wemol-cli-v1.0.0-macos-intel.zip
• wemol-cli-v1.0.0-windows-x86_64.zip
• wemol-cli-official.tar.gz
• SHA256SUMS

FAQ

Authentication required

Run:

wemol-cli login
wemol-cli account

Output key is missing but job seems done

Run:

wemol-cli job tasks <job_id>
wemol-cli job download <job_id>

Security prompts on first launch

Current macOS/Windows builds may trigger Gatekeeper/SmartScreen prompts on first run. This is expected until full signing/notarization rollout.