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Releases: vadanamu/DeepRM

v1.1.3

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@vadanamu vadanamu released this 14 Apr 09:02
0e66cfe

DeepRM v1.1.3

  • Fixed memory leak in pileup

v1.1.2

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@vadanamu vadanamu released this 09 Apr 02:48
b86e3ff

DeepRM v1.1.2

  • Inference optimization and bugfix

v1.1.1.r6

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@vadanamu vadanamu released this 25 Mar 11:53
be4625e

v1.1.1.r6
Add option ('--skip-modbam') to skip modBAM writing in 'deeprm call run' and 'deeprm call pileup'.

v1.1.1.r3

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@vadanamu vadanamu released this 20 Mar 10:37
f7b0588

DeepRM v1.1.1.r3

  • DeepRM's call prep and call pileup now records read's own ID instead on parent's read ID.
  • DeepRM's call pileup now reports modification score in a 0-1 range.

v1.0.9

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@vadanamu vadanamu released this 26 Feb 03:07
9c31be0

v1.0.9

  • Fixed modBAM writer to better follow standard SAM specifications
  • Required Pandas version < 3

v1.0.8

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@vadanamu vadanamu released this 03 Dec 08:46
df82a94

Minor bug fix (path-related)

v1.0.7

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@vadanamu vadanamu released this 18 Nov 04:35
c5607af
  • Now supports ModBAM output format by default.

v1.0.6

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@vadanamu vadanamu released this 11 Nov 06:34

v1.0.6

  • Standard bedMethyl output format support
  • Zenodo DOI archiving

v1.0.5

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@vadanamu vadanamu released this 26 Sep 09:45

Hotfix for genomic alignment support

DeepRM v1.0.4

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@vadanamu vadanamu released this 13 Sep 02:27

DeepRM v1.0.4 (minor hotfix)