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Segmentation fault in rnaseq_collapse

Status: Open.

#246 In ncbi/egapx;

· ld9866 opened on May 14, 2026

‌Arabidopsis thaliana rnaseq_collapse Segmentation fault

Status: Open.

#245 In ncbi/egapx;

· kingbin97 opened on May 12, 2026

bam_bin fails when last bin degenerates to a single-base region at chromosome end

Status: Open.

#238 In ncbi/egapx;

· lixiang117423 opened on Apr 27, 2026

*** EGAPx v0.5.2 Notice ***

Status: Open.

#236 In ncbi/egapx;

· pstrope opened on Apr 24, 2026

rnaseq_collapse runs single-threaded despite SLURM allocation

Status: Open.

#233 In ncbi/egapx;

· gaurav-agavekar opened on Apr 22, 2026

Download genome as part of Offline mode?

Status: Open.

#220 In ncbi/egapx;

· richard-burhans opened on Apr 8, 2026

Isoform nomenclature question

Status: Open.

#217 In ncbi/egapx;

· MonicaPoelchau-USDA opened on Mar 24, 2026

Issue running 0.5.0 with IsoSeq only

Status: Open.

#202 In ncbi/egapx;

· sheinasim-USDA opened on Jan 28, 2026

Use of RNA-seq strand information in EGAPX pipeline

Status: Open.

#172 In ncbi/egapx;

· BitaoQiu opened on Sep 8, 2025

BUG: Treats local read files as SRR, if it supplied as path to read list.

reads errorerror related to long or short readserror related to long or short reads

Status: Open.

#165 In ncbi/egapx;

· Alteroldis opened on Aug 25, 2025