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11 followers · 11 following
  • University of Helsinki
  • Helsinki, Finland

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  1. SegPore SegPore Public

    Nanopore raw signal segmentation and RNA modification estimation.

    Python 13 3

  2. segSHAPE segSHAPE Public

    RNA secondary structure prediction from Nanopore direct RNA sequencing.

    Python 1

  3. nanobaselib/NanoBaseLib nanobaselib/NanoBaseLib Public

    [NeurIPS 2024] A Multi-task Benchmark Dataset for Nanopore Sequencing.

    Python 8

  4. chengl7-lab/scape chengl7-lab/scape Public

    A package for estimating alternative polyadenylation events from scRNA-seq data.

    Python 8 2