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biomguler/README.md

MG_background

Murat Güler

Doctoral Researcher in Genomic Epidemiology
German Cancer Research Center (DKFZ) · Heidelberg University

Personal WebsiteGitHubEmailTwitter


👨‍🔬 About Me

I am a genetic epidemiologist and doctoral researcher studying inherited genetic susceptibility to cancer and complex traits.

My work brings together genome-wide association studies, bioinformatics, machine learning, and large-scale epidemiologic data to investigate cancer risk, prognosis, prevention, and clinical outcomes.

I am pursuing a Ph.D. in Genomic Epidemiology at Heidelberg University and the German Cancer Research Center (DKFZ), with an academic background in Molecular Biology and Genetics.


🧬 Research Interests

  • Cancer and genomic epidemiology
  • Human genetics and inherited disease susceptibility
  • Genome-wide association studies
  • Electronic health record–linked genetic data
  • Cancer risk, prognosis, and prevention
  • Complex traits and pharmacogenomics
  • Machine learning and computational biology
  • Reproducible phenotype and cohort development

🔬 Current Research

I am currently combining electronic health records (EHRs) with genetic data to understand:

  • inherited susceptibility to cancer;
  • genetic factors influencing prognosis and clinical outcomes;
  • relationships between genetic variation and drug response;
  • how genomic data can inform epidemiologic and clinical research.

My previous and ongoing work includes cancer susceptibility GWAS, lymphoid neoplasm classification, pancreatic cancer risk, complex disease genetics, and molecular evolution and systematics.


🛠️ Languages and Tools

  • Programming: R, Python, Bash
  • Research: GWAS, genetic epidemiology, statistical genetics
  • Data: Genomic, epidemiologic, biobank, and EHR-linked datasets
  • Methods: Data analysis, phenotype development, machine learning, and reproducible workflows

📁 Projects and Resources

CanCode

A standardized cancer phenotype framework for reproducible cohort design in biobanks.

i-CLASSi

A standardized lymphoid neoplasm classification framework integrating the InterLymph hierarchy and clinical vocabulary mappings.

GWAS Tutorial

A practical tutorial for genome-wide association study workflows in cancer research.

GWAS Studies

Research projects involving lymphoid neoplasms, pancreatic cancer, cancer susceptibility, and other complex human traits.

➡️ Explore my repositories


🎓 Education

Degree Field Institution Period
Ph.D. Genomic Epidemiology Heidelberg University & DKFZ 2021–2026
M.Sc. Biology Cumhuriyet University 2012–2015
B.Sc. Molecular Biology and Genetics Cumhuriyet University 2007–2011

🤝 Scientific Memberships

  • InterLymph Consortium
  • AVE Alliance
  • International Genetic Epidemiology Society
  • European Hematology Association

📊 GitHub Stats

Murat Güler's most used languages Murat Güler's GitHub statistics Personal website repository

📬 Get in Touch

I am open to collaborations, research inquiries, and discussions related to genomic epidemiology, cancer genetics, bioinformatics, and computational genomics.

Popular repositories Loading

  1. G-WASPiper G-WASPiper Public

    This repository is my collection of pipelines for basic GWAS analysis, written in R to simplify, please cite original tools/approaches referred in the pipelines.

    R 6

  2. LN_Phenocluster LN_Phenocluster Public

    Scripts and pipeline used in the LN phenocluster manuscript

    R 4

  3. biomguler.github.io biomguler.github.io Public

    Personal page

    HTML 1

  4. PDAC-MA-GWAS PDAC-MA-GWAS Public

    Scripts and pipeline used in the pancreatic cancer GWAS

    R 1

  5. biomguler biomguler Public

    Config files for my GitHub profile.

  6. IMMEnSE-website-v02 IMMEnSE-website-v02 Public template

    Forked from stajichlab/stajichlab.github.io

    The IMMEnSE Consortium Website

    SCSS