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@antigenomics

AntigenOmics

Mining antigen and antigen receptor repertoires. Immune repertoire biomarker databases and software tools.

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  1. vdjdb-db vdjdb-db Public

    🗂️ Git-based TCR database storage & management. Submissions welcome!

    Python 152 27

  2. vdjmatch vdjmatch Public

    ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities

    Groovy 39 7

  3. vdjviz vdjviz Public

    🛜 A lightweight immune repertoire browser

    JavaScript 27 8

  4. tcren-ms tcren-ms Public

    📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential

    Parrot 24 4

  5. tcr-annotation-methodology tcr-annotation-methodology Public

    📝 [Paper/Tutorial] T-cell repertoire annotation and motif discovery

    TeX 14 4

  6. public-epitope public-epitope Public

    📝 [Paper] Exploring the landscape of specific TCR precursor frequencies

    1 2

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