feat: Target level mapping metadata#97

Merged

bencap merged 6 commits into

feature/bencap/86/target-level-mapping-metadata

May 6, 2026

Commits on Apr 28, 2026

feat(mapping): add target-level mapping metadata to scoreset output

bencap
and
Copilot
committed
fix(align): handle protein-vs-DNA and malformed PSL blocks in _build_alignment_qc
bencap
committed

Commits on Apr 29, 2026

fix(annotate): ensure JSON output is expanded by serializing without JSON mode
bencap
committed
feat(lookup): enhance gene symbol retrieval by tokenizing target names for better matching
bencap
committed
fix(mapping): update aligner type to reference_accession_passthrough and adjust related annotations

bencap
and
Copilot
committed

Commits on Apr 30, 2026

chore(schema): Update schema to reflect updated output
bencap
committed