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Releases: SuperCowPowers/workbench

v0.8.322

26 Apr 19:32

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  • flake8/linter fixes
  • adding a df_store script to pull and push dataframes from one AWS env to another
  • flake8/linter fixes
  • simplify the endpoint autoscaling utils

v0.8.321

24 Apr 19:36

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  • putting in a conditional so that only regression models calculate uq_metrics()

v0.8.320

23 Apr 22:01

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  • bumping version of workbench for ml_pipeline image

v0.8.318

23 Apr 19:54

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  • put in some NaN guards when splitting on scaffolds or butina
  • add a script for smiles/NaN checks
  • flake8/linter fixes
  • small change to have multi-target models generate same outputs as single-target
  • flake8/linter fixes
  • adding some pytorch experiments
  • setting restore_best_weights to False by default
  • flake8/linter fixes
  • adding threading to the AllChem.MMFFOptimizeMoleculeConfs call
  • adding some reference compounds and profiling for 3D features
  • blog grid spacing update

v0.8.317

21 Apr 20:00

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  • flake8/linter fixes
  • changing/optimizing some of the 3D Feature calculations
  • bumping version of workbench for ml_pipeline image

v0.8.316

21 Apr 18:17

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  • making different varients of the pytorch models
  • flake8/linter fixes
  • changing the default splits to be scaffold
  • adding some confidence tests
  • removing the df[prediction_std] overwrite as the templates already compute this internally
  • some cleanup

v0.8.315

21 Apr 13:34

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  • flake8/linter fixes
  • changes to InferenceCache to handle typing across chunks more robustly
  • flake8/linter fixes
  • converting boltzman vars/references to full

v0.8.314

20 Apr 20:28

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  • some tweaks to batch/chunk logic

v0.8.313

20 Apr 18:54

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  • bumping version of workbench-bridges
  • adding a compaction admin script
  • flake8/linter fixes
  • trying to simplify logic around max_instances, chucks, and batches
  • new logic for inference cache to manage concurrency issues
  • adding an admin script that tests inference cache concurrency
  • adding a preflight check to make sure the account has the quota for max_instances of that specific instance type
  • putting in max_in_flight logic
  • changes to the auto-scaling for endpoints
  • moving the ParameterStore implementation over to workbench-bridges
  • refactoring how feature_lists() are computed (mostly internal now)
  • flake8/linter fixes
  • adding a FeatureEndpoint() class that has a feature_list() method
  • flake8/linter fixes
  • making the new async args more visible through API, also moving common code into the feature_endpoint utils
  • adding support for min_instances, max_instances, auto_scaling_mode, parameters when setting up an AsyncEndpoint
  • flake8/linter fixes
  • put in a max_instances arg that's used for AsyncEndpoints
  • flake8/linter fixes
  • adding a register_features() method so that it can be used by downstream consumers
  • adding a register_features() method so that it can be used by downstream consumers
  • adding a register_features() method to EndpointCore, so that it can be used by downstream consumers

v0.8.312

19 Apr 16:54

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  • logic fix for detecting async endpoints
  • flake8/linter fixes
  • renaming all the feature endpoints
  • adding a reference set for flexible compounds + test