Extract reusable Google Health code into google-health-library

google-health-library/build.gradle

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+
+group = 'org.radarbase'
+version = '0.0.1'
+
+apply plugin: 'maven-publish'
+
+repositories {
+    mavenCentral()
+}
+
+dependencies {
+    implementation libs.kotlin.stdlib
+
+    implementation libs.okhttp
+
+    implementation libs.radar.schemas.commons
+
+    implementation libs.jackson.annotations
+
+    implementation libs.jackson.databind
+
+    implementation libs.avro
+
+    implementation libs.jackson.datatype.jsr310
+
+    testImplementation libs.kotlin.test
+
+    testImplementation libs.kotlin.test.junit
+}
+
+project.afterEvaluate {
+    publishing {
+        publications {
+            library(MavenPublication) {
+                setGroupId "$group"
+                setArtifactId "google-health-library"
+                version "$version"
+                from components.java
+            }
+        }
+    }
+}

google-health-library/src/main/kotlin/org/radarbase/googlehealth/converter/AvroConverter.kt

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+/*
+ * Copyright 2026 King's College London
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.radarbase.googlehealth.converter
+
+import com.fasterxml.jackson.databind.JsonNode
+import org.apache.avro.specific.SpecificRecord
+import org.radarbase.googlehealth.user.User
+import java.io.IOException
+
+interface AvroConverter {
+
+    val topic: String
+
+    @Throws(IOException::class)
+    fun convert(
+        tree: JsonNode,
+        user: User,
+    ): List<Pair<SpecificRecord, SpecificRecord>>
+}

google-health-library/src/main/kotlin/org/radarbase/googlehealth/converter/DailyRestingHeartRateGoogleHealthAvroConverter.kt

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+/*
+ * Copyright 2026 King's College London
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.radarbase.googlehealth.converter
+
+import com.fasterxml.jackson.databind.JsonNode
+import org.apache.avro.specific.SpecificRecord
+import org.radarbase.googlehealth.user.User
+import org.radarbase.googlehealth.util.restingHeartRate
+
+class DailyRestingHeartRateGoogleHealthAvroConverter(topic: String) :
+    GoogleHealthAvroConverter(topic) {
+    override fun convertDataPoint(
+        point: JsonNode,
+        user: User,
+    ): List<Pair<SpecificRecord, SpecificRecord>> {
+        val data = point["dailyRestingHeartRate"] ?: return emptyList()
+        val dateNode = data["date"] ?: return emptyList()
+        val bpm = data["beatsPerMinute"]?.asInt() ?: return emptyList()
+        val isoDate = String.format(
+            "%04d-%02d-%02d",
+            dateNode["year"].asInt(),
+            dateNode["month"].asInt(),
+            dateNode["day"].asInt(),
+        )
+        val record = restingHeartRate {
+            date = isoDate
+            timeReceived = nowEpochSeconds()
+            restingHeartRate = bpm
+        }
+        return listOf(user.observationKey to record)
+    }
+}

google-health-library/src/main/kotlin/org/radarbase/googlehealth/converter/DailySleepTemperatureDerivationsGoogleHealthAvroConverter.kt

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+/*
+ * Copyright 2026 King's College London
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.radarbase.googlehealth.converter
+
+import com.fasterxml.jackson.databind.JsonNode
+import org.apache.avro.specific.SpecificRecord
+import org.radarbase.googlehealth.user.User
+import org.radarbase.googlehealth.util.skinTemperature
+import org.radarcns.connector.fitbit.FitbitSkinTemperatureLogType
+
+class DailySleepTemperatureDerivationsGoogleHealthAvroConverter(topic: String) :
+    GoogleHealthAvroConverter(topic) {
+    override fun convertDataPoint(
+        point: JsonNode,
+        user: User,
+    ): List<Pair<SpecificRecord, SpecificRecord>> {
+        val data = point["dailySleepTemperatureDerivations"] ?: return emptyList()
+        val nightly = data["nightlyTemperatureCelsius"]?.takeIf { it.isNumber }?.floatValue() ?: return emptyList()
+        val baseline = data["baselineTemperatureCelsius"]?.takeIf { it.isNumber }?.floatValue() ?: return emptyList()
+        val time = parseDate(data) ?: return emptyList()
+        val record = skinTemperature {
+            this.time = epochSeconds(time)
+            timeReceived = nowEpochSeconds()
+            relativeTemperature = nightly - baseline
+            logType = FitbitSkinTemperatureLogType.UNKNOWN
+        }
+        return listOf(user.observationKey to record)
+    }
+}

google-health-library/src/main/kotlin/org/radarbase/googlehealth/converter/ExerciseGoogleHealthAvroConverter.kt

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+/*
+ * Copyright 2026 King's College London
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.radarbase.googlehealth.converter
+
+import com.fasterxml.jackson.databind.JsonNode
+import org.apache.avro.specific.SpecificRecord
+import org.radarbase.googlehealth.user.User
+import org.radarbase.googlehealth.util.activityHeartRate
+import org.radarbase.googlehealth.util.activityLogRecord
+
+class ExerciseGoogleHealthAvroConverter(topic: String) : GoogleHealthAvroConverter(topic) {
+    override fun convertDataPoint(
+        point: JsonNode,
+        user: User,
+    ): List<Pair<SpecificRecord, SpecificRecord>> {
+        val data = point["exercise"] ?: return emptyList()
+        val (start, end) = parseInterval(data) ?: return emptyList()
+        val offsetSeconds = parseUtcOffsetSeconds(
+            data["interval"]?.get("startUtcOffset")?.asText(),
+        )
+        val durationSec = (end.epochSecond - start.epochSecond).toFloat().coerceAtLeast(0.0f)
+        val metrics = data["metricsSummary"]
+        val distanceKm = metrics?.get("distanceMillimeters")?.takeIf { !it.isNull }
+            ?.asDouble()?.let { it.toFloat() / 1_000_000f }
+        val caloriesKcal = metrics?.get("caloriesKcal")?.takeIf { !it.isNull }?.asDouble()
+        val energyKj = caloriesKcal?.let { (it * KCAL_TO_KJ).toFloat() }
+        val stepCount = metrics?.get("steps")?.takeIf { !it.isNull }?.asInt()
+        val avgHr = metrics?.get("averageHeartRateBeatsPerMinute")?.takeIf { !it.isNull }?.asInt()
+        val avgHeartRate = avgHr?.let { activityHeartRate { mean = it } }
+        val exerciseType = data["exerciseType"]?.asText()
+        val activityId = (point["name"]?.asText() ?: exerciseType ?: "")
+            .hashCode().toLong()
+        val record = activityLogRecord {
+            time = epochSeconds(start)
+            timeReceived = nowEpochSeconds()
+            timeZoneOffset = offsetSeconds
+            timeLastModified = epochSeconds(end)
+            duration = durationSec
+            durationActive = durationSec
+            id = activityId
+            name = data["displayName"]?.asText() ?: exerciseType
+            logType = point["dataSource"]?.get("recordingMethod")?.asText()
+            type = null
+            source = null
+            manualDataEntry = null
+            energy = energyKj
+            levels = null
+            heartRate = avgHeartRate
+            steps = stepCount
+            distance = distanceKm
+            speed = null
+        }
+        return listOf(user.observationKey to record)
+    }
+
+    companion object {
+        private const val KCAL_TO_KJ = 4.1868
+    }
+}

google-health-library/src/main/kotlin/org/radarbase/googlehealth/converter/GoogleHealthAvroConverter.kt

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+/*
+ * Copyright 2026 King's College London
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.radarbase.googlehealth.converter
+
+import com.fasterxml.jackson.databind.JsonNode
+import org.apache.avro.specific.SpecificRecord
+import org.radarbase.googlehealth.user.User
+import java.time.Instant
+import java.time.LocalDate
+import java.time.LocalDateTime
+import java.time.LocalTime
+import java.time.ZoneOffset
+
+abstract class GoogleHealthAvroConverter(override val topic: String) : AvroConverter {
+
+    abstract fun convertDataPoint(
+        point: JsonNode,
+        user: User,
+    ): List<Pair<SpecificRecord, SpecificRecord>>
+
+    override fun convert(tree: JsonNode, user: User): List<Pair<SpecificRecord, SpecificRecord>> {
+        val points = tree["dataPoints"] ?: tree["rollupDataPoints"] ?: return emptyList()
+        if (!points.isArray) return emptyList()
+        return points.flatMap { convertDataPoint(it, user) }
+    }
+
+    companion object {
+        fun parseInterval(node: JsonNode): Pair<Instant, Instant>? {
+            val interval = node["interval"] ?: return null
+            val start = runCatching {
+                Instant.parse(interval["startTime"]?.asText() ?: return null)
+            }.getOrNull() ?: return null
+            val end = runCatching {
+                Instant.parse(interval["endTime"]?.asText() ?: return null)
+            }.getOrNull() ?: return null
+            return start to end
+        }
+
+        fun parseSampleTime(node: JsonNode): Instant? {
+            val sample = node["sampleTime"] ?: return null
+            val text = sample["physicalTime"]?.asText()?.takeIf { it.isNotEmpty() } ?: return null
+            return runCatching { Instant.parse(text) }.getOrNull()
+        }
+
+        fun parseDate(node: JsonNode, utcOffsetSeconds: Int = 0): Instant? {
+            val dateNode = node["date"] ?: return null
+            val year = dateNode["year"]?.asInt() ?: return null
+            val month = dateNode["month"]?.asInt() ?: return null
+            val day = dateNode["day"]?.asInt() ?: return null
+            val local = runCatching { LocalDate.of(year, month, day) }.getOrNull() ?: return null
+            val timeNode = node["time"]
+            val dateTime = if (timeNode != null && !timeNode.isNull) {
+                LocalDateTime.of(
+                    local,
+                    LocalTime.of(
+                        timeNode["hours"]?.asInt() ?: 0,
+                        timeNode["minutes"]?.asInt() ?: 0,
+                        timeNode["seconds"]?.asInt() ?: 0,
+                        timeNode["nanos"]?.asInt() ?: 0,
+                    ),
+                )
+            } else {
+                local.atStartOfDay()
+            }
+            return dateTime.toInstant(ZoneOffset.ofTotalSeconds(utcOffsetSeconds))
+        }
+
+        fun parseUtcOffsetSeconds(durationText: String?): Int {
+            if (durationText.isNullOrEmpty()) return 0
+            val trimmed = durationText.trim().removeSuffix("s")
+            val seconds = trimmed.toLongOrNull() ?: return 0
+            return seconds.toInt()
+        }
+
+        fun epochSeconds(instant: Instant): Double = instant.toEpochMilli() / 1000.0
+
+        fun nowEpochSeconds(): Double = Instant.now().toEpochMilli() / 1000.0
+    }
+}

google-health-library/src/main/kotlin/org/radarbase/googlehealth/converter/HeartRateGoogleHealthAvroConverter.kt

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+/*
+ * Copyright 2026 King's College London
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.radarbase.googlehealth.converter
+
+import com.fasterxml.jackson.databind.JsonNode
+import org.apache.avro.specific.SpecificRecord
+import org.radarbase.googlehealth.user.User
+import org.radarbase.googlehealth.util.intradayHeartRate
+
+class HeartRateGoogleHealthAvroConverter(topic: String) : GoogleHealthAvroConverter(topic) {
+    override fun convertDataPoint(
+        point: JsonNode,
+        user: User,
+    ): List<Pair<SpecificRecord, SpecificRecord>> {
+        val data = point["heartRate"] ?: return emptyList()
+        val time = parseSampleTime(data) ?: return emptyList()
+        val bpm = data["beatsPerMinute"]?.asInt() ?: return emptyList()
+        val record = intradayHeartRate {
+            this.time = epochSeconds(time)
+            timeReceived = nowEpochSeconds()
+            timeInterval = 1
+            heartRate = bpm
+        }
+        return listOf(user.observationKey to record)
+    }
+}