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1. google/ffn google/ffn Public

   Flood-Filling Networks for instance segmentation in 3d volumes.

   Python 349 107

2. ilastik/ilastik ilastik/ilastik Public

   ilastik-shell, applets, and workflows to string them together.

   Python 405 186

3. Parsl/parsl Parsl/parsl Public

   Parsl - a Python parallel scripting library

   Python 625 210

4. CRBS/cdeep3m CRBS/cdeep3m Public

   Please go to https://github.com/CRBS/cdeep3m2 for most recent version

   Shell 59 10

5. constantinpape/cluster_tools constantinpape/cluster_tools Public

   Distributed segmentation for bio-image-analysis

   Python 42 15