Coarse-Grained S. cerevisiae Model

This repository contains the source code for the coarse-grained, systemic, and dynamic model of Saccharomyces cerevisiae.

Related publishments:

• Emergence of Orchestrated and Dynamic Metabolism of Saccharomyces cerevisiae.
• Coarse-Grained Modeling Elucidates Differential Metabolism of Saccharomyces cerevisiae under Varied Nutrient Limitations.

Model

• use the main function yeast_model_update_ribosome.m to run the model
• submodules of the model can be found in the model folder

Parameter

• file: read_parametersv2.m