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1. VesselBoost VesselBoost Public

   Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensitivity towards small vessels

   Jupyter Notebook 28 6

2. MipView MipView Public

   MipView is a lightweight patch-wise visualizing and computational app

   Python

3. SkelHub SkelHub Public

   SkelHub is a unified Python toolbox for multiple tubular object skeletonization algorithms, and an evaluation workflow for the output skeletons quality.

   Python

4. ohbm/reprochallenge2026 ohbm/reprochallenge2026 Public

   Repository for the 2026 OHBM-OSSIG Reproducibility Challenge

   CSS

5. neurocontainers neurocontainers Public

   Forked from neurodesk/neurocontainers

   The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines

   Python

6. neurocommand neurocommand Public

   Forked from neurodesk/neurocommand

   A flexible, scalable, and easy to use data analysis environment for reproducible neuroimaging

   Shell