Pipeline for snRNA sequence data analysis from the MDN project.
The pipeline can be run by either the CLI interface using snakemake or from the web portal.
More technical details can be found in the docs section. There's also a Getting started document for more information regarding the UI of the web portal.
MDN Pipeline — Computational pipeline for snRNA-seq data analysis from the MDN project. Copyright (C) 2024 Manikandan Narayanan, BIRDSgroup, IIT Madras
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see https://www.gnu.org/licenses/.