magmap/modules.json at master · nf-core/magmap · GitHub

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{
    "name": "nf-core/magmap",
    "homePage": "https://github.com/nf-core/magmap",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "bbmap/align": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/bbmap/align/bbmap-align.diff"
                    },
                    "bbmap/bbduk": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/bbmap/bbduk/bbmap-bbduk.diff"
                    },
                    "bbmap/index": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/bbmap/index/bbmap-index.diff"
                    },
                    "cat/cat": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "cat/fastq": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "custom/dumpsoftwareversions": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "fastqc": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "008f9d3e61209bf995edac3ba531f54e269e1215",
                        "installed_by": ["modules"]
                    },
                    "pigz/compress": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "prokka": {
                        "branch": "master",
                        "git_sha": "2dc23692bd1c3a23a12cfd959808a8fe7e3c6557",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/prokka/prokka.diff"
                    },
                    "samtools/flagstat": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["bam_stats_samtools"]
                    },
                    "samtools/idxstats": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["bam_stats_samtools"]
                    },
                    "samtools/index": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["bam_sort_stats_samtools"]
                    },
                    "samtools/sort": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["bam_sort_stats_samtools"]
                    },
                    "samtools/stats": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["bam_stats_samtools"]
                    },
                    "sourmash/gather": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/sourmash/gather/sourmash-gather.diff"
                    },
                    "sourmash/index": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/sourmash/index/sourmash-index.diff"
                    },
                    "sourmash/sketch": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/sourmash/sketch/sourmash-sketch.diff"
                    },
                    "subread/featurecounts": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/subread/featurecounts/subread-featurecounts.diff"
                    },
                    "trimgalore": {
                        "branch": "master",
                        "git_sha": "0991b1032cccfcd9245ef59c6e56d6092ac0b3e7",
                        "installed_by": ["modules"]
                    },
                    "wget": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/wget/wget.diff"
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "bam_sort_stats_samtools": {
                        "branch": "master",
                        "git_sha": "156feda0cb6589cd29c04902004fa3b53bc00205",
                        "installed_by": ["subworkflows"]
                    },
                    "bam_stats_samtools": {
                        "branch": "master",
                        "git_sha": "156feda0cb6589cd29c04902004fa3b53bc00205",
                        "installed_by": ["bam_sort_stats_samtools"]
                    },
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "1a545fcbd762911c21a64ced3dbef99b2b51ac75",
                        "installed_by": ["subworkflows"],
                        "patch": "subworkflows/nf-core/utils_nextflow_pipeline/utils_nextflow_pipeline.diff"
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "a3fb7351b1fdb2b1de282b765816bbea190e86a8",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "ce3424257de288c0ca25f097a68d3a289da23f12",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}