Add hands-on sections

[rkhetani]

Before and/or during raw data QC lesson

• Logging in to the cluster
• Starting an interactive session
• Few basic commands: mkdir, cd, ls -l, tree
• introduction to modules
• run fastqc
• run fastqc using a slurm script on all 6 files
• use filezilla to copy over fastqc result

After DE analysis, but before the R-based data visualization

• Introduction to IGV and looking at 2 or 3 top DE genes

Before Functional analysis, could be part of visualization

• basic introduction to RStudio panels
• open a prewritten script and run lines/chunks of code to wrangle tables and draw a volcano plot or heatmap