Neural Sequence Decoder

This repo is for the RNN decoder.

Requirements

Python >= 3.9

Install the package with the following command:

pip install -e .

cd examples
./train_seed_model.sh  # See comments in the script for how to locate your downloaded data.

Raw character error rate (CER) on heldout blocks:

	GRU	Bidirectional-GRU
CER	3.3% ± 0.1%	3.2% ± 0.1%

To train the model:

cd examples
./train_willett_nature_baseline.sh

Pre-made tfrecords can be downloaded here.