Document.bbl

\begin{thebibliography}{1}

\bibitem{cherry2011saccharomyces}
J~Michael Cherry, Eurie~L Hong, Craig Amundsen, Rama Balakrishnan, Gail
  Binkley, Esther~T Chan, Karen~R Christie, Maria~C Costanzo, Selina~S Dwight,
  Stacia~R Engel, et~al.
\newblock Saccharomyces genome database: the genomics resource of budding
  yeast.
\newblock {\em Nucleic acids research}, page gkr1029, 2011.

\bibitem{ciandrini2013ribosome}
Luca Ciandrini, Ian Stansfield, and M~Carmen Romano.
\newblock Ribosome traffic on mrnas maps to gene ontology: genome-wide
  quantification of translation initiation rates and polysome size regulation.
\newblock {\em PLoS computational biology}, 9(1):e1002866, 2013.

\bibitem{Gritsenko2014}
Alexey~A Gritsenko, Marc Hulsman, Marcel J~T Reinders, and De~Ridder.
\newblock {An unbiased quantitative model of S. cerevisiae protein translation
  derived from ribosome profiling data}.
\newblock pages 1--7, 2014.

\bibitem{nagalakshmi2008transcriptional}
Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, Chong Shou, Debasish Raha, Mark
  Gerstein, and Michael Snyder.
\newblock The transcriptional landscape of the yeast genome defined by rna
  sequencing.
\newblock {\em Science}, 320(5881):1344--1349, 2008.

\bibitem{yassour2009ab}
Moran Yassour, Tommy Kaplan, Hunter~B Fraser, Joshua~Z Levin, Jenna Pfiffner,
  Xian Adiconis, Gary Schroth, Shujun Luo, Irina Khrebtukova, Andreas Gnirke,
  et~al.
\newblock Ab initio construction of a eukaryotic transcriptome by massively
  parallel mrna sequencing.
\newblock {\em Proceedings of the National Academy of Sciences},
  106(9):3264—3269, 2009.

\end{thebibliography}