Merge branch 'devel' into main (release v0.0.4)

Candidate for v0.0.4 release.

+ Shell script wrappers for deployment working (include ingress).
+ Helm chart deployment working (no ingress).
+ Database persistence issues resolved.

Resolves #5, #6.

Author: Adam McCartney

deployments/pacman-deployment.yaml

@@ -17,7 +17,7 @@ spec:
         name: pacman
     spec:
       containers:
-      - image: ghcr.io/austriandatalab/pacman:latest
+      - image: ghcr.io/austriandatalab/pacman:v0.0.4
         name: pacman
         ports:
         - containerPort: 8080

helm/templates/mongo-deployment.yaml

@@ -49,6 +49,10 @@ spec:
       - name: mongo-db
         persistentVolumeClaim:
           claimName: mongo-storage
+      securityContext: 
+        runAsNonRoot: true
+        runAsUser: 1001
+        fsGroup: 1001
       containers:
       - name: mongo
         image: "{{ .Values.mongo.image.repository }}:{{ .Values.mongo.image.tag | default .Chart.AppVersion }}"
@@ -73,11 +77,28 @@ spec:
             secretKeyRef:
               key: database-user
               name: {{ .Release.Name }}-mongo-auth
+        - name: ALLOW_EMPTY_PASSWORD
+          value: "no"
+        - name: MONGODB_SYSTEM_LOG_VERBOSITY
+          value: "0"
+        - name: MONGODB_DISABLE_SYSTEM_LOG
+          value: "no"
+        - name: MONGODB_DISABLE_JAVASCRIPT
+          value: "no"
+        - name: MONGODB_ENABLE_JOURNAL
+          value: "yes"
+        - name: MONGODB_PORT_NUMBER
+          value: "27017"
+        - name: MONGODB_ENABLE_IPV6
+          value: "no"
+        - name: MONGODB_ENABLE_DIRECTORY_PER_DB
+          value: "no"
         ports:
           - name: mongo
             containerPort: 27017
         volumeMounts:
         - name: mongo-db
+          subPath: mongodb
           mountPath: /bitnami/mongodb/
         readinessProbe:
           exec:
@@ -87,3 +108,4 @@ spec:
             - -c
             - mongo 127.0.0.1:27017/$MONGODB_DATABASE -u $MONGODB_USERNAME -p $MONGODB_PASSWORD
               --eval="quit()"
+

helm/templates/pacman-deployment.yaml

@@ -34,17 +34,17 @@ spec:
           image: "{{ .Values.image.repository }}:{{ .Values.image.tag | default .Chart.AppVersion }}"
           imagePullPolicy: {{ .Values.image.pullPolicy }}
           ports:
-            - name: http
-              containerPort: 8080
-              protocol: TCP
+          - name: http-server
+            containerPort: 8080
+            protocol: TCP
           livenessProbe:
             httpGet:
               path: /
-              port: http
+              port: 8080
           readinessProbe:
             httpGet:
               path: /
-              port: http
+              port: 8080
           env:
           - name: MONGO_SERVICE_HOST
             value: mongo

helm/values.yaml

@@ -5,10 +5,10 @@
 replicaCount: 1
 
 image:
-  repository: mbwali/pacman # adlsregistrysbx.azurecr.io/tutorials/pacman
+  repository: ghcr.io/austriandatalab/pacman
   pullPolicy: Always
   # Overrides the image tag whose default is the chart appVersion.
-  tag: "latest"
+  tag: "v0.0.4"
 
 imagePullSecrets: []
 nameOverride: ""