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Merge pull request #55 from napakalas/curation
Remove aliases not used by SCKAN connectivity, and annotate or remove nerve cuffs to prevent unnecessary rasterisation.
2 parents c9e7e44 + 983192f commit 59e2d2d

5 files changed

Lines changed: 99 additions & 452 deletions

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‎connectivity_terms_female.json‎

Lines changed: 10 additions & 217 deletions
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@@ -1,165 +1,4 @@
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[
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{
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"id": "UBERON:0001508",
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"name": "arch of aorta",
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"aliases": [
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"ILX:0738302"
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]
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},
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{
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"id": "UBERON:0001629",
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"name": "carotid body",
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"aliases": [
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"ILX:0736966"
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]
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},
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{
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"id": "UBERON:0003708",
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"name": "carotid sinus",
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"aliases": [
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"ILX:0731873"
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]
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},
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{
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"id": "UBERON:0001894",
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"name": "diencephalon",
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"aliases": [
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"ILX:0103217"
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]
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},
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{
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"id": "UBERON:0000388",
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"name": "epiglottis",
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"aliases": [
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"ILX:0103886"
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]
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},
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{
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"id": "UBERON:0001649",
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"name": "glossopharyngeal nerve",
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"aliases": [
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"ILX:0723837"
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]
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},
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{
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"id": "UBERON:0001898",
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"name": "hypothalamus",
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"aliases": [
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"ILX:0105177"
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]
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},
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{
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"id": "UBERON:0002440",
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"name": "inferior cervical ganglion",
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"aliases": [
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"ILX:0734766"
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]
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},
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{
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"id": "UBERON:0001532",
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"name": "internal carotid artery",
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"aliases": [
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"ILX:0736647"
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]
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},
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{
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"id": "UBERON:0001737",
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"name": "larynx",
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"aliases": [
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"ILX:0727818"
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]
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},
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{
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"id": "UBERON:0001896",
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"name": "medulla oblongata",
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"aliases": [
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"ILX:0738301"
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]
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},
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{
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"id": "UBERON:0001891",
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"name": "midbrain",
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"aliases": [
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"ILX:0106935"
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]
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},
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{
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"id": "UBERON:0001990",
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"name": "middle cervical ganglion",
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"aliases": [
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"ILX:0726454"
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]
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},
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{
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"id": "UBERON:0004982",
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"name": "mucosa of epiglottis",
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"aliases": [
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"ILX:0736652"
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]
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},
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{
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"id": "UBERON:0005020",
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"name": "mucosa of tongue",
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"aliases": [
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"ILX:0731712"
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]
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},
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{
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"id": "UBERON:0009050",
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"name": "nucleus of solitary tract",
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"aliases": [
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"ILX:0738323"
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]
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},
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{
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"id": "UBERON:0001884",
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"name": "phrenic nerve",
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"aliases": [
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"ILX:0736057"
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]
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},
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{
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"id": "UBERON:0000988",
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"name": "pons",
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"aliases": [
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"ILX:0109019"
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]
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},
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{
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"id": "UBERON:0001989",
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"name": "superior cervical ganglion",
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"aliases": [
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"ILX:0725956"
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]
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},
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{
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"id": "UBERON:0011326",
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"name": "superior laryngeal nerve",
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"aliases": [
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"ILX:0731053"
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]
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},
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{
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"id": "UBERON:0001723",
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"name": "tongue",
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"aliases": [
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"ILX:0111810"
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]
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},
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{
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"id": "UBERON:0003126",
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"name": "trachea",
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"aliases": [
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"ILX:0729183"
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]
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},
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{
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"id": "UBERON:0001759",
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"name": "vagus nerve",
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"aliases": [
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"ILX:0733375"
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]
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},
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{
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"id": [
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"UBERON:0007240",
@@ -1047,6 +886,10 @@
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[
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"UBERON:0015173",
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[]
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],
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[
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"ILX:0794731",
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[]
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]
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]
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},
@@ -1077,6 +920,10 @@
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[
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"ILX:0794769",
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[]
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],
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[
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"ILX:0794767",
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[]
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]
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]
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},
@@ -1090,20 +937,9 @@
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[
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"ILX:0794770",
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[]
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]
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]
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},
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{
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"id": [
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"ILX:0793769",
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[
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"UBERON:0000995"
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]
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],
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"name": "smooth muscle/uterus",
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"aliases": [
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],
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[
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"ILX:0794731",
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"ILX:0794768",
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[]
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]
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]
@@ -1163,36 +999,6 @@
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]
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]
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},
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{
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"id": [
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"ILX:0793769",
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[
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"UBERON:0000002"
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]
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],
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"name": "smooth muscle/uterine cervix",
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"aliases": [
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[
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"ILX:0794768",
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[]
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]
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]
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},
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{
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"id": [
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"ILX:0793769",
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[
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"UBERON:0009853"
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]
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],
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"name": "smooth muscle/body of uterus",
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"aliases": [
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[
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"ILX:0794767",
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[]
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]
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]
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},
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{
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"id": [
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"UBERON:0001981",
@@ -1462,19 +1268,6 @@
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]
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]
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},
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{
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"id": [
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"ILX:0793218",
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[]
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],
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"name": "white communicating ramus of twelfth thoracic spinal nerve",
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"aliases": [
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[
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"TEMP:MISSING_white-communicating-ramus",
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[]
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]
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]
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},
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{
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"id": [
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"UBERON:0002113",

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